Only 20-30% of patients with identified infectious source; ~80% of FN from endogenous flora. Micro-organisms involved are bacteria (GNB 40%, GPC 60%, rarely anaerobes), fungal (rare, common in high risk, candida and aspergillus), viral (community-acquired).

Definitions

  • Febrile: Temp ≥38.3 C (101 F) once or ≥38 C (100.4 F) over 1h
    • Causes: infection, immune system coming back with more WBC, chemotherapy releasing inflammatory markers (histamine), cancer
  • Neutropenia: ANC<500 cells/mm3 or <1000 cells/mm3 and a predicted decline to ≤500 over next 48h.
  • Nadir: lowest ANC levels. Usually happens at day 7-14, recovers by day 21
  • Profound neutropenia: ANC<100 (or ANC 0). APC can be used in ANC 0 (shows early sign of bone marrow recovery)

Risk Tools (MASCC Scores)

Prognostic FactorWeight
Burden of illness            
No or mild symptoms            
Moderate symptoms

5
3
No hypotension (SBP >90 mmHg)5
No chronic obstructive pulmonary disease
Solid tumor or no previous fungal infection
4
4
No dehydration requiring parenteral fluids
Outpatient status
3
3
Age <60 years2

Work-Up

  • H&P: comorbidities/meds, time since last chemo, recent ABx, tobacco/alcohol use, infection from household, drug allergy, clinical instability
  • Lab (CBC, EMP, LFTs, renal),  chest X-ray
  • ID: site of infection, culture (blood x2, urine [if urinary catheter, abnormal UA] stool [diarrhea C.diff/enteric], skin [aspirate/biopsy]), UA, consider fungal/mycobacteria if vascular access, PCR/DFA (viral) – expect ESBL, VRE, MRSA, Pseudomonas

Management

Goal: avoid bloodstream infection, avoid delay/reduction of the dose.

Clinical Pearls

  • Choice of ABx depends on high/low risk FN, causative micro-organism, site, source, local antibiogram and organ dysfunction.
  • ↑ neutropenia = ↑ duration of antibiotic = ↑ fungal infection risk. Can start antibiotic in suspected/expected neutropenia for >7 days.
  • Empiric IV broad-spectrum: cefepime, carbapenems, piperacillin-tazobactam. Adjust in 3-5 days based on cultures.
  • Oral antibiotics: fluoroquinolones or sulfamethoxazole/trimethoprim

Empiric IV Abx in high risk FN

  • High risk definition: acute leukemias (ALL), strong chemo. Most peds are high risk, and mostly are already on Abx compared to adults
  • Anti-pseudomonal: β-lactams (cefepime, pip/tazo), carbapenems (mero, imi/cila), ceftazidime (weak GPC, high breakthrough infection).
    • Clindamycin (pen/ceph allergy, cheaper, more GPC coverage, mutliple capsules per day and PO suspension tastes bad)
    • Aztreonam (pen/ceph allergic/anaphylaxis, $$$)
  • Reserve second GN ABx or vanco (MRSA history, SSTI, catheter) for hemodynamically unstable, high resistance suspicion/antibiogram.
    • GPC (MRSA): vancomycin, daptomycin (not pneumonia, deactivated by lung surfactant), linezolid, ceftaroline (pneumonia)
  • Re-assess in 2-3 days and consider D/C

Outpatient PO Abx in low risk FN

  • Low-risk definition: palliative treatment, non-traditional chemo; can be seen in adults. Rarely seen in peds.
  • Consider palatability, cooperation (in peds), drug availability (as PO liquid for peds), mucositis, able to swallow, no N/V, not on FQ ppx
  • Meds: Ciprofloxacin + amoxicillin/clavulanic acid, Levofloxacin, or Moxifloxacin (no pseudomonal coverage)
  • Return to clinic if any positive culture, new signs and symptoms, persistent/recurrent 3-5 days, oral intolerance, IV infusion antibiotic

Monitoring Daily

Clinically stable or improving; fever decreasing or persistent; otherwise clinically stable:

  • No change in empiric regimen. Fever could be from bone marrow recovery (increasing WBC), cancer, chemo (histamine).
  • Continue at least until ANC ≥500 cells/mcL and increasing
  • Modify regimen based on new clinical or microbiologic data

Not responding/clinically worsening; persistently febrile; persistently bacteremic:

  • ID consult; broaden coverage based on clinical and microbiologic data to include other organisms not covered by empiric regimen
  • Consider imaging studies and further microbiological testing
  • Consider adding G-CSF

Fever ≥4 days: add mold active anti-fungal

Discontinuation

  • D/C if all applies: afebrile ≥24h , negative blood cx >48h, bone marrow recovery (ANC >100 or trending up). Continue antibiotic; no matter the duration; until ANC>100
  • Low risk (not in peds): D/C at 72h if afebrile ≥24h and negative blood culture

Fungal infection

  • High risk: AML, high-risk ALL, relapsed acute leukemias, BMT, prolonged neutropenia, prolonged corticosteroids
  • Suspect fungal infxn if prolonged fever ≥96h (4 days) while on broad-spectrum ABx
  • BD-glucan testing results takes time (not routinely done in pediatrics), therefore antifungal is started unless BD-glucan testing is indicated.
Antifungal AgentPlace in TherapyDoseClinical Pearls
Amphotericin BBroad spectrum (Candida, Aspergillus spp. (excluding A. terreus), Mucorales, rarer molds, C. neoformans, and dimorphic fungi)AmB-D (per indication): 0.5–1.5 mg/kg IV daily ABLC: 5 mg/kg IV daily L-AMB: 3–5 mg/kg IV dailyADE: nephrotoxic (saline loading), e- wasting, infusion reaction (antipyretics, antihistamine, meperidine (for rigors); slower rate) Lipisomal: Less infusion rxn, renal toxic Avoid in Scedosporium, Lomentospora
Fluconazole IV/POMost BMT on fluconazole, not routinely used; candida400 mg IV/PO daily (renal adjustment)DDI. Avoid in C. glabrata/krusei/auris, Aspergillus spp., Mucorales
Caspofungin IVCandida, inpatient; invasive aspergillosis (2nd line, subsequent); refractory fluconazoleLD 70 mg, then 50 mg daily (35 mg daily in mod liver disease) Aspergillosis (2nd line, some institutes): 70 mg dailyADE: tolerable. Poor CNS, urinary, eye penetration Avoid in C.auris, Trichophyton, Cryptococcus, Mucorales
Micafungin IVCandida, outpatient; invasive aspergillosis (2nd line, subsequent)Treatment: 100 mg daily Ppx: 50-100 mg daily Aspergillus (2nd line, some institutes): 150 mg IV dailyTolerable ADE (poor CNS, urinary, eye penetration) Avoid in C.auris, Trichophyton, Cryptococcus, Mucorales
Posaconazole IV/ PO DRPPx (neutropenia with MDS and AML; HSCT significant GvHD) Refractory infection, candida, invasive aspergillus, some mucorales, some rarer molds, dimorphic fungi, C. neoformansTreatment/ppx: LD 300mg BID x1d IV/PO then 300mg daily (Renal adjustments)Better absorption with tablets IV who is oral intolerable DDI: PPIs
VoriconazoleInvasive Aspergillus, candida, rare molds, dimorphic fungi, C. neoformans; refractory fluconazoleTreatment of invasive aspergillosis LD 6 mg/kg IV or 400 mg PO BID x 2 doses on Day 1 MD 4 mg/kg IV BID, or 200mg (≥40kg), 100mg PO BID (<40kg) Treatment of candidemia in patients without neutropenia LD 6 mg/kg IV or 400 mg PO BID x 2 doses on Day 1 MD 3–4 mg/kg IV BID, or 200mg (≥40kg) or 100mg (<40kg) PO BIDPoor activity against Mucorales ADE: SCC risk, high phos, fluorosis, bone/muscle pain, visual disturbances, hallucinations Evidence for combination therapy with an echinocandin remains limited IV formulation should be used with caution in patients with significant renal dysfunction
TMP/SMXPneumocystis jirovicii, Toxoplasma gondii and NocardiaProphylaxis: SS daily or DS TIW Therapy: 15 mg/kg/d in divided doses q6–8 hours per TMPMonitor for renal insufficiency, high K, myelosuppression, hepatotoxicity DDI: methotrexate

Viral infection

Antiviral AgentPlace in TherapyDoseClinical Pearls
AcyclovirHSV, VZVProphylaxis: HSV (400–800 mg PO BID); VZV in alloHCT (400–800 mg PO BID)1 Post-VZV exposure ppx: 800 mg PO x5/d Significant mucocutaneous HSV: 5 mg/kg IV q8h x7–10 d Single dermatomal VZV: 800 mg PO x5/d or 10 mg/kg IV q8h x7–10d Disseminated HSV/VZV + viral encephalitis: 10 mg/kg IV q8hHydration to avoid crystal nephropathy with high dose Dosing based on IBW
GanciclovirCMV, HSV, VZVPreemptive therapy for CMV: 5 mg/kg q12h; if CMV remains detectable, further ID evaluation may be required Treatment: CMV disease (5 mg/kg q12h for induction f/b 5 mg/kg/day for maintenance and resolution of all symptoms)ADE: myelosuppression Clinical data are limited for HHV-6/8
ValganciclovirCMV, HSV, VZVPreemptive therapy and treatment for CMV: Induction with 900 mg PO BID until negative test; consider additional 900 mg PO daily for maintenance after a negative testADE: myelosuppression Clinical data are limited for HHV-6/8

Duration of therapy

Skin/soft tissue5-14 days
Bacterial sinusitis7-14 days
Bacterial pneumonia5-14 days
Gram-negative bacteremia Gram-positive bacteremia S. aureus bacteremia Yeast bacteremia Catheter bacteremia7-14 days 7-14 days 4 weeks after first negative blood culture; ID consult ≥2 weeks after first negative blood culture Catheter removal for Candida or other yeasts, S. aureus, P.aeruginosa, Corynebacterium jeikeium, Acinetobacter spp., nontuberculous mycobacteria, molds, VRE, Steno. maltophilia, and other MDROs
Candida Mold≥2 weeks after first negative blood culture ≥ 12 weeks
HSV/VZV Influenza A7-10 days (uncomplicated localized disease to skin; acyclovir, valacyclovir, famciclovir) ≥ 5 days of oseltamivir

Other Cancer-Related Infections

FindingEvaluationManagement
Mouth/mucosal Necrotizing ulceration• HSV, VZV diagnostics • Culture and Gram stains; Fungal • Biopsy suspicious lesions• Ensure adequate anaerobic activity • Consider anti-HSV/VZV therapy • Consider systemic antifungal therapy
Mouth/mucosal Thrush • Fluconazole first-line therapy • Voriconazole, posaconazole, echinocandin (if fluconazole refractory)
Mouth/mucosal Vesicular lesionsHSV, VZV diagnosticsAnti-HSV therapy (category 1)
   
   
   

Medications

Antibactieral Agents (Gram-Positive Activity)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antibactieral Agents (Gram-Pseudomonal Activity)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antibactieral Agents (Other Activity)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antifungal Agents (Azoles)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antifungal Agents (Amphotericin B)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antifungal Agents (Echinocandins)

AgentsSpectrumDose, ADE, Clinical Pearls
   

Antiviral Agents

AgentsSpectrumDose, ADE, Clinical Pearls
   

Febrile Neutropenia Prophylaxis (Prevention is the Key)

NCCN Hematopoietic Growth Factors – Version 3.2026 – December 5, 2025

Prevention interventions: G-CSF prophylaxis, antimicrobial prophylaxis, vaccinations

Granulocyte Colony Stimulating Factor (G-CSF) Prophylaxis

Primary prophylaxis (prevent neutropenia/FN with first cycle of chemotherapy)

  • High risk of FN (>20%): give G-CSF prophylaxis (category 1)
    • Anticancer therapy: NHL (BV-CHP, DA-EPOCH, HyperCVAD, dd-CHOP-14, Pola-R-CHOP, DHAP, ESHAP, ICE, MINE), HL (BV-AVD, eBEACOPP, BrECADD), MM (DT-PACE ± Bortezomib, DCEP, high-dose cyclophosphamide), ALL regimens, breast (dd-AC f/b dd-paclitaxel, TAC, TCH, TCH), bladder (dd-MVAC), RCC (doxo/gem), testicular (VeIP, VIP, TIP), SCLC (topotecan), ovarian (topotecan, docetaxel, TC), melanoma (CVD, PHP), bone (VAIA, VDC-IE, doxo/cis, VDC, VIDE), soft-tissue sarcoma (MAID, doxo, ifos/doxo), head/neck SCC (TPF)
    • Other risk factors: poor performance status, HIV (low CD4 counts), chronic immunosuppression in post-txp (organ/stem cell txp)
ProphylaxisTreatmentTherapeutic in radiation-induced myelosuppression (H-ARS)
Pegfilgrastim (or biosimilars) Eflapegrastim-xnst Efbemalenograstim alfa-vuxw Filgrastim (in practice though not mentioned in NCCN)(GF during FN; discontinued at time of ANC recovery) Filgrastim (or biosimilars) 5 mcg/kg tbo-filgrastim 5 mcg/kg Sargramostim 250 mcg/m2/dayFilgrastim (or biosimilars) tbo-filgrastim Pegfilgrastim (or biosimilars) Sargramostim Eflapegrastim-xnst Efbemalenograstim alfa-vuxw
  • Intermediate risk of FN (10-20%): consider G-CSF prophylaxis if ≥1 risk factors (prior chemo/RT, persistent neutropenia, bone marrow involvement, recent surgery ± open wounds, liver (bilirubin >2g/dL), renal (CrCl<50), age >65 on full chemo dose intensity)
    • Examples: NHL (GDP, CHOP, CDOP, bendamustine), breast (docetaxel, AC, paclitaxel q21d, sacituzumab govitecan-hziy), prostate (Cabazitaxel, docetaxel), testicular (BEP, cis/etopo), SCLC (carbo/etopo), NSCLC (cis/pacli, cis/vinor, cis/docet, cis/etop, carbo/pacli, docetaxel), adenocarcinoma (gem/docetaxel), esophageal/gastric (iri/cis, FLOT), CRC (FOLFIRINOX), pancreatic (FOLFIRINOX), ovarian (carbo/doce, cis/etop), cervical (cis/topo, pacli/cisp, topo, iri), uterine sarcoma (docetaxel), occult (doc/gem)
  • Low risk of FN (<10%): G-CSF is not recommended, may consider if ≥2 risk factor (prior chemo/RT, persistent neutropenia, bone marrow involvement, recent surgery ± open wounds, liver (bilirubin >2g/dL), renal (CrCl<50), age >65 on full chemo dose intensity)

Secondary prophylaxis (prevent recurrent neutropenias), consider adding G-CSFs on future cycles.

Timing of G-CSFs

AgentTiming
Filgrastim SC 5mcg/kg/dayStart 24-72h after chemo, give daily until post-nadir ANC recovery (~5–7 days; no study showed duration)
Pegfilgrastim SC 6mg onceGive once, ≥24h after chemo, not within 14 days of next chemo
tbo-filgrastim SC 5mcg/kg/daySame as filgrastim timing and duration
Avoid G-CSFs during or within 24h of chemotherapy as the chemo cytotoxicity will kill more neutrophils; making G-CSFs ineffective. Avoid pegfilgrastim in weekly chemo regimens due to its long half-life (15-80h) as it overlaps the anticancer and pegfilgrastim effects. ANC: normal (≥1500–8000), mild neutropenia (1000-1499), moderate (500-999), severe (<500), agranulocytosis (<100)

Important information

  • Consider dose reduction instead of CSF in palliative patients (not worth the ADE of G-CSF and cost).
  • Risk of bleomycin-induced pulmonary toxicity/fibrosis may be increased with G-CSFs (conflicting data, some may give filgrastim same day, some doesn’t)
  • ES-SCLC: Trilaciclib can be used as ppx before platinum/etoposide ± ICI or topotecan-regimens, to reduce chemo-induced myelosuppression

Granulocyte-CSFs

  • Common ADE: bone pain (cetirizine (long-acting), loratadine (sedation, anticholinergic), diphenhydramine (sedation)], fever, headache; splenomegaly, hyperuricemia, rash, hypotension, leukocytosis, hypersensitivity to proteins produced by E.coli (filgrastim is made from E.coli)
MedicationDosingClinical Pearls
Filgrastim (Neupogen)
(category 1) Biosimilars: Tbo-filgrastim (Granix)
(category 1) Filgrastim-sndz (Zarxio) Filgrastim-aafi (Nivestym)
5 mcg/kg/d SC (round to the vial size per institution) until post-nadir ANC recovery to normal or near-normaltbo-filgrastim (not biosimilar): Higher fluid retention/fever vs. filgrastim Warnings: allergic reactions (rash, facial edema, wheezing, dyspnea, hypotension, tachycardia, anaphylaxis), splenic rupture, ARDS, alveolar hemorrhage/hemoptysis, sickle cell crises in SCD, MDS/AML with chronic use  Precautions • Rare: vasculitis, sweet syndrome • Immunogenicity (with biosimilars) Clinical trials checked ANC daily to see the curve, but the goal is to prevent FN and not only ANC recovery. Shorter duration showed less efficacy
Pegfilgrastim (Neulasta) (category 1) Pegfilgrastim-jmdb (Fulphila) Pegfilgrastim-cbqv (Udenyca) Pegfilgrastim-bmez (Ziextenzo) Pegfilgrastim-apgf (Nyvepria)6mg SC oncePK: long half-life (15-80h) Can be used in Q3-week regimens (Category 1), Q2-week regimens (supported by Phase II trials), but not recommended in Q1-week regimens Neulasta On-pro: novel delivery device, auto-inject 27h after application. Preferred for outpatient setting. Watch for delivery failure with On-Pro Warning, Precautions, ADE same as filgrastim
Eflapegrastim-xnst (Rolvedon)13.2 mg SC dailyAdminister ~24h after chemo. Do not give ~14 days before or 24h after chemo Newer long-acting G-CSF. Higher potency in some trials
Efbemalenograstim alfa-vuxw (Ryzneuta)20 mg SC onceAdminister ~24h after chemo. Do not give ~14 days before or 24h after chemo Newest agent (FDA approved late 2022). Pegylated, long-acting

Granulocyte/macrophage-CSF (GM-CSF)

  • Hematopoietic growth factor that stimulates the development and production of WBC (granulocytes, macrophages, monocytes). These effector cells help to mediate antibody-dependent cell mediated cytotoxicity (ADCC).
    • The Fc fragment of the Dinutuximab mAb binds the Fc receptors on these effector cells, which in turn engulf the bound tumor cell and destroy it.
  • ADE (from pro-inflammatory cytokine release like IL-1, IL-6, TNF-α): fever/chills, fatigue, malaise, bone pain/myalgias, headache, injection site reaction/rash, N/V, diarrhea, edema (peripheral, facial)
    • Serious: capillary leak syndrome (hypotension, edema, hypoalbuminemia, hemoconcentration), pulmonary toxicity (dyspnea, pleural/pericardial effusion, pulmonary infiltrates; caution with bleomycin), hypersensitivity reactions (anaphylaxis, urticaria, angioedema), leukocytosis/thrombocytosis (may cause elevated WBCs and platelets; monitor CBC), arrhythmias/chest pain (especially in those with pre-existing cardiac conditions)
    • Rare/Immune-mediated Effects: autoimmune-like syndromes (Sweet’s syndrome – acute febrile neutrophilic dermatosis), vasculitis, hearing loss (rare), renal dysfunction (rare cases of proteinuria, hematuria)
MedicationDosingClinical Pearls
Sargramostim (Leukine)250 mcg/m²/day SC or IVStart 24–72h post-chemo and continue until ANC >1,500 x 2 daysNot routinely used for FN prophylaxis per NCCN (use G-CSFs instead). May improve recovery of monocytes/macrophages tooFDA indication: AML induction in older adults (to ↓infection duration), PBPCs mobilization, post-transplant recovery (bone marrow or stem cell) ADE: More inflammatory effects (vs filgrastim; fever, bone pain, fluid retention, capillary leak), diarrhea, nausea, first-dose effect (flushing, hypotension, dyspnea), pericardial/pleural effusion (rare). IV ADE differs from SCUsed with T-VEC (cancer vaccine) recruit immune cells (dendritic cells, macrophages, T-cells) to enhance anti-tumor response and kill cancers in melanoma (immunoambulization) COVID19 (see pic below)
Molgramostim5-10 mcg/kg/day SC (60k-110k 000 IU/kg)Start 24h post-chemo and continue for 7-10 days.ADE: transient hypotension and flushing, bone/MSK pain, fever and chills, dyspnoea, rash, fatigue, GI effects; antibodies. Rare: anaphylactic reactions, pleural and pericardial effusion, cardiac arrhythmias. Fetotoxic in animal studiesPrecaution: myeloid malignancies, pulmonary disease

Antibiotic Prophylaxis

  • Goal: reduce rate of bacteremia, infxn, mortality
  • Infection risk categories
    • Low: solid tumor, neutropenia <7 days
    • Intermediate: chronic leukemias, autoHSCT, lymphomas, MM, neutropenia 7-10 days
    • High: acute leukemias, alloHSCT, neutropenia >10 days; ANC nadir <500 for ≥7 days
  • Broad-spectrum antimicrobials: antibacterial (FQ: levofloxacin preferred), antifungal (azole, echinocandins), antiviral (HSV/VZV)
  • Risk of antibiotic prophylaxis: C.diff, invasive fungal, Abx resistance
  • Stop antibiotic prophylaxis if ANC ≥500

Vaccinations

Avoid LIVE vaccines during chemotherapy or period immunosuppression. Herd immunity (all household members should be up-to-date)

InfluenzaPneumococcalMeningococcalHPV
AnnuallyNew, vaccine-naïve: PCV12  PPSV23 8-wk after Prior PPSV23: PCV13 after ≥1 year Follow high-risk adult guidelines for subsequent PPSV23High risk: persistent complement deficiency, on eculizumab, asplenia (anatomic/functional)Offer to ≤27 years old